Name | Bin Size (in KB) | Gene Expression | TAD | Enhancer | FIRe | ChIP-Seq | CTCF | PMID | |
---|---|---|---|---|---|---|---|---|---|
1 | Adrenal | 40 | 1 | 1 | 1 | 1 | 1 | 0 | 27851967 |
2 | Adult Cortex | 10 | 1 | 0 | 0 | 0 | 0 | 0 | https://doi.org/10.1101/406330 |
3 | Aorta | 40 | 1 | 1 | 1 | 1 | 1 | 0 | 27851967 |
4 | Bladder | 40 | 1 | 1 | 1 | 1 | 0 | 0 | 27851967 |
5 | Dorsolateral Prefrontal Cortex | 40 | 1 | 1 | 0 | 1 | 1 | 0 | 27851967 |
6 | Fetal Cortex | 10 | 1 | 0 | 0 | 0 | 0 | 0 | https://doi.org/10.1101/406330 |
7 | Fetal Lung Fibroblast Cell | 40 | 1 | 1 | 1 | 1 | 1 | 1 | 27851967 |
8 | Hippocampus | 40 | 1 | 1 | 0 | 1 | 1 | 0 | 27851967 |
9 | Human Embryonic Stem Cell | 40 | 1 | 1 | 1 | 1 | 1 | 1 | 27851967 |
10 | Left Ventricle | 40 | 1 | 1 | 1 | 1 | 1 | 0 | 27851967 |
11 | Liver | 40 | 1 | 1 | 0 | 1 | 1 | 0 | 27851967 |
12 | Lung | 40 | 1 | 1 | 1 | 1 | 1 | 0 | 27851967 |
13 | Lymphoblastoid (Rao 2014) | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 25497547 |
14 | Lymphoblastoid (Schmitt.) | 40 | 1 | 1 | 1 | 1 | 1 | 1 | 27851967 |
15 | Macrophages (Phanstiel) | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 28890333 |
16 | Mesenchymal Cell | 40 | 1 | 1 | 0 | 1 | 1 | 1 | 27851967 |
17 | Mesendoderm Cell | 40 | 1 | 1 | 0 | 1 | 1 | 1 | 27851967 |
18 | Monocytes (Phanstiel) | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 28890333 |
19 | Neural Progenitor | 40 | 1 | 1 | 0 | 1 | 1 | 1 | 27851967 |
20 | Ovary | 40 | 1 | 1 | 1 | 1 | 1 | 0 | 27851967 |
21 | Pancreas | 40 | 1 | 1 | 1 | 1 | 1 | 0 | 27851967 |
22 | Psoas | 40 | 1 | 1 | 1 | 1 | 1 | 0 | 27851967 |
23 | Right Ventricle | 40 | 1 | 1 | 1 | 1 | 1 | 0 | 27851967 |
24 | Small Bowel | 40 | 1 | 1 | 1 | 1 | 1 | 0 | 27851967 |
25 | Spleen | 40 | 1 | 1 | 1 | 1 | 1 | 0 | 27851967 |
26 | Trophoblast-like Cell | 40 | 1 | 1 | 0 | 1 | 1 | 1 | 27851967 |
Name | Bin Size (in KB) | Gene Expression | TAD | Enhancer | FIRe | ChIP-Seq | CTCF | PMID | |
---|---|---|---|---|---|---|---|---|---|
1 | Excitatory neurons (H3K4me3) | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 33057195 |
2 | HCASMC (coronary artery smooth muscle; H3K27ac) | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 28945252 |
3 | Intermediate Progenitor cells (H3K4me3) | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 33057195 |
4 | Interneurons (H3K4me3) | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 33057195 |
5 | Leukemia K562 (H3K27ac) | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 28945252 |
6 | Lymphoblastoid (GM12878; H3K27ac) | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 28945252 |
7 | My-La (H3K27ac) | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 28945252 |
8 | Naive T (CTCF) | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 28945252 |
9 | Naive T (H3K27ac) | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 28945252 |
10 | Radial glia (H3K4me3) | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 33057195 |
11 | T-helper 17 (H3K27ac) | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 28945252 |
12 | T-reg (H3K27ac) | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 28945252 |
Name | Has Read Count | Gene Expression | TAD | Enhancer | FIRe | ChIP-Seq | CTCF | PMID | |
---|---|---|---|---|---|---|---|---|---|
1 | Activated Total CD4+ T Cells | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 27863249 |
2 | Adrenal Gland (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
3 | Aorta (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
4 | Astrocyte | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 31367015 |
5 | Bladder (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
6 | Cardiomyoctes (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
7 | Dorsolateral Prefrontal Cortex (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
8 | Endothelial Precursors | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 27863249 |
9 | Erythroblasts | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 27863249 |
10 | Esophagus (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
11 | Fat (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
12 | Fetal Thymus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 27863249 |
13 | Fibroblast (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
14 | Gastric (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
15 | Hippocampus (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
16 | Human Embryonic Stem Cell (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
17 | Left Ventricle (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
18 | Liver (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
19 | Lung (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
20 | Lymphoblastoid (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
21 | Macrophages M0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 27863249 |
22 | Macrophages M1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 27863249 |
23 | Macrophages M2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 27863249 |
24 | Megakaryocytes | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 27863249 |
25 | Mesenchymal Stem Cell (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
26 | Mesendoderm (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
27 | Monocytes | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 27863249 |
28 | Naive B cells | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 27863249 |
29 | Naive CD4+ T Cells | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 27863249 |
30 | Naive CD8+ T Cells | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 27863249 |
31 | Neural Progenitor Cell (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
32 | Neutrophils | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 27863249 |
33 | Non-activated Total CD4+ T Cells | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 27863249 |
34 | Ovary (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
35 | Pancreas (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
36 | Psoas (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
37 | Right Atrium (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
38 | Right Ventricle (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
39 | Sigmoid Colon (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
40 | Small Bowel (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
41 | Spleen (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
42 | Thymus (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
43 | Total B cells | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 27863249 |
44 | Total CD4+ T Cells | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 27863249 |
45 | Total CD8+ T Cells | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 27863249 |
46 | Trophoblast (Jung et al.) | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 31501517 |
47 | iPSC-derived Hippocampal DG-like Neuron | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 31367015 |
48 | iPSC-derived Lower Motor Neuron | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 31367015 |
49 | iPSC-induced Excitatory Neuron | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 31367015 |